Download Metagenomics For Microbiology Book PDF

Download full Metagenomics For Microbiology books PDF, EPUB, Tuebl, Textbook, Mobi or read online Metagenomics For Microbiology anytime and anywhere on any device. Get free access to the library by create an account, fast download and ads free. We cannot guarantee that every book is in the library.

Metagenomics for Microbiology

Metagenomics for Microbiology
  • Author : Jacques Izard,Maria Rivera
  • Publisher :Unknown
  • Release Date :2014-11-07
  • Total pages :188
  • ISBN : 9780124105089
GET BOOK HERE

Summary : Concisely discussing the application of high throughput analysis to move forward our understanding of microbial principles, Metagenomics for Microbiology provides a solid base for the design and analysis of omics studies for the characterization of microbial consortia. The intended audience includes clinical and environmental microbiologists, molecular biologists, infectious disease experts, statisticians, biostatisticians, and public health scientists. This book focuses on the technological underpinnings of metagenomic approaches and their conceptual and practical applications. With the next-generation genomic sequencing revolution increasingly permitting researchers to decipher the coding information of the microbes living with us, we now have a unique capacity to compare multiple sites within individuals and at higher resolution and greater throughput than hitherto possible. The recent articulation of this paradigm points to unique possibilities for investigation of our dynamic relationship with these cellular communities, and excitingly the probing of their therapeutic potential in disease prevention or treatment of the future. Expertly describes the latest metagenomic methodologies and best-practices, from sample collection to data analysis for taxonomic, whole shotgun metagenomic, and metatranscriptomic studies Includes clear-headed pointers and quick starts to direct research efforts and increase study efficacy, eschewing ponderous prose Presented topics include sample collection and preparation, data generation and quality control, third generation sequencing, advances in computational analyses of shotgun metagenomic sequence data, taxonomic profiling of shotgun data, hypothesis testing, and mathematical and computational analysis of longitudinal data and time series. Past-examples and prospects are provided to contextualize the applications.

The New Science of Metagenomics

The New Science of Metagenomics
  • Author : National Research Council,Division on Earth and Life Studies,Board on Life Sciences,Committee on Metagenomics: Challenges and Functional Applications
  • Publisher :Unknown
  • Release Date :2007-05-24
  • Total pages :170
  • ISBN : 0309185750
GET BOOK HERE

Summary : Although we can't usually see them, microbes are essential for every part of human life -- indeed all life on Earth. The emerging field of metagenomics offers a new way of exploring the microbial world that will transform modern microbiology and lead to practical applications in medicine, agriculture, alternative energy, environmental remediation, and many others areas. Metagenomics allows researchers to look at the genomes of all of the microbes in an environment at once, providing a "meta" view of the whole microbial community and the complex interactions within it. It's a quantum leap beyond traditional research techniques that rely on studying -- one at a time -- the few microbes that can be grown in the laboratory. At the request of the National Science Foundation, five Institutes of the National Institutes of Health, and the Department of Energy, the National Research Council organized a committee to address the current state of metagenomics and identify obstacles current researchers are facing in order to determine how to best support the field and encourage its success. The New Science of Metagenomics recommends the establishment of a "Global Metagenomics Initiative" comprising a small number of large-scale metagenomics projects as well as many medium- and small-scale projects to advance the technology and develop the standard practices needed to advance the field. The report also addresses database needs, methodological challenges, and the importance of interdisciplinary collaboration in supporting this new field.

Handbook of Molecular Microbial Ecology I

Handbook of Molecular Microbial Ecology I
  • Author : Frans J. de Bruijn
  • Publisher :Unknown
  • Release Date :2011-10-14
  • Total pages :800
  • ISBN : 9781118010495
GET BOOK HERE

Summary : The premiere two-volume reference on revelations from studying complex microbial communities in many distinct habitats Metagenomics is an emerging field that has changed the way microbiologists study microorganisms. It involves the genomic analysis of microorganisms by extraction and cloning of DNA from a group of microorganisms, or the direct use of the purified DNA or RNA for sequencing, which allows scientists to bypass the usual protocol of isolating and culturing individual microbial species. This method is now used in laboratories across the globe to study microorganism diversity and for isolating novel medical and industrial compounds. Handbook of Molecular Microbial Ecology is the first comprehensive two-volume reference to cover unculturable microorganisms in a large variety of habitats, which could not previously have been analyzed without metagenomic methodology. It features review articles as well as a large number of case studies, based largely on original publications and written by international experts. This first volume, Metagenomics and Complementary Approaches, covers such topics as: Background information on DNA reassociation and use of 16 rRNA and other DNA fingerprinting approaches Species designation in microbiology Metagenomics: Introduction to the basic tools with examples Consortia and databases Bioinformatics Computer-assisted analysis Complementary approaches—microarrays, metatranscriptomics, metaproteomics, metabolomics, and single cell analysis A special feature of this volume is the highlighting of the databases and computer programs used in each study; they are listed along with their sites in order to facilitate the computer-assisted analysis of the vast amount of data generated by metagenomic studies. Handbook of Molecular Microbial Ecology I is an invaluable reference for researchers in metagenomics, microbiology, and environmental microbiology; those working on the Human Microbiome Project; microbial geneticists; molecular microbial ecologists; and professionals in molecular microbiology and bioinformatics.

Metagenomics

Metagenomics
  • Author : Muniyandi Nagarajan
  • Publisher :Unknown
  • Release Date :2017-11-06
  • Total pages :398
  • ISBN : 9780128134030
GET BOOK HERE

Summary : Metagenomics: Perspectives, Methods, and Applications provides thorough coverage of the growing field of metagenomics. A diverse range of chapters from international experts offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools, and recent metagenomic studies in various environments. The emphasis on application makes this text particularly useful for applied researchers, practitioners, clinicians and students seeking to employ metagenomic approaches to advance knowledge in the biomedical and life sciences. Case-study based application chapters examine topics ranging from viral metagenome profiling, metagenomics in oral disease and health, metagenomic insights into the human gut microbiome and metabolic syndromes, and more. Additionally, perspectives on future potential at the end of each chapter provoke new thought and motivations for continued study in this exciting and fruitful research area. Provides thorough coverage of the rapidly growing field of metagenomics, with an emphasis on applications of relevance to translational researchers, practitioners, clinicians and students Features a diverse range of chapters from international experts that offer an introduction to the field and examine methods for metagenomic analysis of microbiota, metagenomic computational tools and research pipelines Highlights perspectives on future potential at the end of each chapter to provoke new thought and motivations for continued study in this exciting and fruitful research area

From Genes to Species: Novel Insights from Metagenomics

From Genes to Species: Novel Insights from Metagenomics
  • Author : Eamonn P. Culligan,Roy D. Sleator
  • Publisher :Unknown
  • Release Date :2016-10-07
  • Total pages :229
  • ISBN : 9782889199754
GET BOOK HERE

Summary : The majority of microbes in many environments are considered “as yet uncultured” and were traditionally considered inaccessible for study through the microbiological gold standard of pure culture. The emergence of metagenomic approaches has allowed researchers to access and study these microbes in a culture-independent manner through DNA sequencing and functional expression of metagenomic DNA in a heterologous host. Metagenomics has revealed an extraordinary degree of diversity and novelty, not only among microbial communities themselves, but also within the genomes of these microbes. This Research Topic aims to showcase the utility of metagenomics to gain insights on the microbial and genomic diversity in different environments by revealing the breadth of novelty that was in the past, largely untapped.

Handbook of Molecular Microbial Ecology II

Handbook of Molecular Microbial Ecology II
  • Author : Frans J. de Bruijn
  • Publisher :Unknown
  • Release Date :2011-09-27
  • Total pages :609
  • ISBN : 9780470647196
GET BOOK HERE

Summary : "Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches is the first comprehensive reference covering the various metagenomics in a large variety of habitats, which could not previously have been analysed without metagenomic methodology. This Volume includes topics such as species designations in microbiology, metagenomics, consortia and databases, bioinformatics, microarrays, and other metagenomics applications. This reference is ideal for researchers in metagenomics, microbiology, environmental microbiology, those working on the Human Microbiome Project, microbial geneticists, molecular microbiology, and bioinformatics"--

Functional Metagenomics: Tools and Applications

Functional Metagenomics: Tools and Applications
  • Author : Trevor C. Charles,Mark R. Liles,Angela Sessitsch
  • Publisher :Unknown
  • Release Date :2017-10-09
  • Total pages :253
  • ISBN : 9783319615103
GET BOOK HERE

Summary : In this book, the latest tools available for functional metagenomics research are described.This research enables scientists to directly access the genomes from diverse microbial genomes at one time and study these “metagenomes”. Using the modern tools of genome sequencing and cloning, researchers have now been able to harness this astounding metagenomic diversity to understand and exploit the diverse functions of microorganisms. Leading scientists from around the world demonstrate how these approaches have been applied in many different settings, including aquatic and terrestrial habitats, microbiomes, and many more environments. This is a highly informative and carefully presented book, providing microbiologists with a summary of the latest functional metagenomics literature on all specific habitats.

Microbial Metagenomics, Metatranscriptomics, and Metaproteomics

Microbial Metagenomics, Metatranscriptomics, and Metaproteomics
  • Author : Edward F. DeLong
  • Publisher :Unknown
  • Release Date :2013
  • Total pages :598
  • ISBN : 012407863X
GET BOOK HERE

Summary : This volume of Methods in Enzymology attempts to encapsulate many late-breaking and transformative methods and approaches that are now accelerating advances in microbial biology and ecology. The chapters are loosely organized into five sections: single-cell population genomics, microbial community genomics, microbial community transcriptomics, microbial community proteomics, and microbial community informatics. Each chapter encapsulates a specific developing area and enabling technology, under the general framework of microbial community "omics."

Metagenomics: Techniques, Applications, Challenges and Opportunities

Metagenomics: Techniques, Applications, Challenges and Opportunities
  • Author : Reena Singh Chopra
  • Publisher :Unknown
  • Release Date :2021
  • Total pages :229
  • ISBN : 9789811565298
GET BOOK HERE

Summary :

Microbial Diversity in the Genomic Era

Microbial Diversity in the Genomic Era
  • Author : Surajit Das,Hirak Ranjan Dash
  • Publisher :Unknown
  • Release Date :2018-09-20
  • Total pages :710
  • ISBN : 9780128148501
GET BOOK HERE

Summary : Microbial Diversity in the Genomic Era presents insights on the techniques used for microbial taxonomy and phylogeny, along with their applications and respective pros and cons. Though many advanced techniques for the identification of any unknown bacterium are available in the genomics era, a far fewer number of the total microbial species have been discovered and identified to date. The assessment of microbial taxonomy and biosystematics techniques discovered and practiced in the current genomics era with suitable recommendations is the prime focus of this book. Discusses the techniques used for microbial taxonomy and phylogeny with their applications and respective pros and cons Reviews the evolving field of bacterial typing and the genomic technologies that enable comparative analysis of multiple genomes and the metagenomes of complex microbial environments Provides a uniform, standard methodology for species designation

Metagenomics of the Human Body

Metagenomics of the Human Body
  • Author : Karen E. Nelson
  • Publisher :Unknown
  • Release Date :2010-11-16
  • Total pages :351
  • ISBN : 1441970894
GET BOOK HERE

Summary : The book brings a completely different perspective than available books by combining the information gained from the human genome with that derived from parallel metagenomic studies, and new results from investigating the effects of these microbes on the host immune system. Although there are a number of books that focus on the human genome that are currently available, there are no books that bring to the forefront the mix of the human genome and the genomes and metagenomes of the microbial species that live within and on us.

Advances in Bioremediation of Wastewater and Polluted Soil

Advances in Bioremediation of Wastewater and Polluted Soil
  • Author : Naofumi Shiomi
  • Publisher :Unknown
  • Release Date :2015-09-09
  • Total pages :284
  • ISBN : 9789535121657
GET BOOK HERE

Summary : The pollution of soil and groundwater by heavy metals and other chemicals is becoming a serious issue in many countries. However, the current bioremediation processes do not often achieve sufficient remediation, and more effective processes are desired. This book deals with advances in the bioremediation of polluted soil and groundwater. In the former chapters of this book, respected researchers in this field describe how the optimization of microorganisms, enzymes, absorbents, additives and injection procedures can help to realize excellent bioremediation. In the latter chapters, other researchers introduce bioremediation processes that have been performed in the field and novel bioremediation processes. Thus, the readers will be able to obtain new ideas about effective bioremediation as well as important information about recent advances in bioremediation.

Metagenomics: Methods and Protocols

Metagenomics: Methods and Protocols
  • Author : Wolfgang R. Streit,Rolf Daniel
  • Publisher :Unknown
  • Release Date :2018-12-14
  • Total pages :320
  • ISBN : 1493982745
GET BOOK HERE

Summary :

Metagenomics

Metagenomics
  • Author : Diana Marco
  • Publisher :Unknown
  • Release Date :2011
  • Total pages :295
  • ISBN : 1904455875
GET BOOK HERE

Summary : This book is essential reading for all researchers currently performing metagenomics studies and is highly recommended for all students and scientists wishing to increase their understanding of this field.

Frontiers in Soil and Environmental Microbiology

Frontiers in Soil and Environmental Microbiology
  • Author : Suraja Kumar Nayak,Bibhuti Bhusan Mishra
  • Publisher :Unknown
  • Release Date :2020-03-03
  • Total pages :349
  • ISBN : 9780429941047
GET BOOK HERE

Summary : Soil harbours a wide range of microorganisms with biotic potentials which can be explored for social benefits. The book Frontiers in Soil and Environmental Microbiology comprises an overview of the complex inter-relationship between beneficial soil microbes and crop plants, and highlights the potential for utilisation to enhance crop productivity, bioremediation and soil health. The book focusses on important areas of research such as biocide production, pesticide degradation and detoxification, microbial decay processes, remediation of soils contaminated with toxic metals, industrial wastes, and hydrocarbon pollutants. Features Presents the state of the art of microbial research in environmental and soil microbiology Discusses an integrated and systematic compilation of microbes in the soil environment and its role in agriculture and plant growth and productivity Elucidates microbial application in environmental remediation Explores advanced genomics topics for uncultivable microbes of soil

Microbial Ecology

Microbial Ecology
  • Author : Diana Marco
  • Publisher :Unknown
  • Release Date :2019-01-31
  • Total pages :126
  • ISBN : 1912530023
GET BOOK HERE

Summary : Selected recent hot-topics in the application of advanced omics methods to the field of microbial ecology.

Metagenomics

Metagenomics
  • Author : Diana Marco
  • Publisher :Unknown
  • Release Date :2010
  • Total pages :212
  • ISBN : 1904455549
GET BOOK HERE

Summary : Metagenomics is a rapidly growing field of research that has had a dramatic effect on the way we view and study the microbial world. By permitting the direct investigation of bacteria, viruses, and fungi, irrespective of their culturability and taxonomic identities, metagenomics has changed microbiological theory and methods and has also challenged the classical concept of species. This new field of biology has proven to be rich and comprehensive and is making important contributions in many areas including ecology, biodiversity, bioremediation, bioprospection of natural products, and medicine. This book addresses, in a coherent manner, the diverse and multiple aspects of metagenomics and the multiplicity of its potential applications. Renowned authors from around the world have contributed chapters covering the new theoretical insights, the more recent applications, and the dynamically developing methods of data acquisition and analysis. Topics include: conceptual frameworks * tools and methods * integration of complementary approaches * horizontal gene transfer * analysis of complex microbial communities * public data resources * plant-microbe interactions * bioremediation * industrial bioproducts * archaeal metagenomics * bioprospecting novel genes * the human microbiome * and philosophical themes in metagenomics. The book is essential reading for all researchers currently performing metagenomics studies and it is highly recommended for all students and scientists wishing to increase their understanding of this field.

Mining of Microbial Wealth and MetaGenomics

Mining of Microbial Wealth and MetaGenomics
  • Author : Vipin Chandra Kalia,Yogesh Shouche,Hemant J. Purohit,Praveen Rahi
  • Publisher :Unknown
  • Release Date :2017-10-30
  • Total pages :461
  • ISBN : 9789811057083
GET BOOK HERE

Summary : The existence of living organisms in diverse ecosystems has been the focus of interest to human beings, primarily to obtain insights into the diversity and dynamics of the communities. This book discusses how the advent of novel molecular biology techniques, the latest being the next-generation sequencing technologies, helps to elucidate the identity of novel organisms, including those that are rare. The book highlights the fact that oceans, marine environments, rivers, mountains and the gut are ecosystems with great potential for obtaining bioactive molecules, which can be used in areas such as agriculture, food, medicine, water supplies and bioremediation. It then describes the latest research in metagenomics, a field that allows elucidation of the maximum biodiversity within an ecosystem, without the need to actually grow and culture the organisms. Further, it describes how human-associated microbes are directly responsible for our health and overall wellbeing.“/p>

Molecular Microbial Ecology

Molecular Microbial Ecology
  • Author : Mark Osborn,Cindy Smith
  • Publisher :Unknown
  • Release Date :2004-03-01
  • Total pages :256
  • ISBN : 9780203503393
GET BOOK HERE

Summary : Microoganisms are distributed across every ecosystem, and microbial transformations are fundamental to the operation of the biosphere. Microbial ecology is the study of this interaction between microorganisms and their environment, and arguably represents one of the most important areas of biological research. Yet for many years our study of microbial flora was severely limited: the primary method of culturing microorganisms on media allowed us to study only between 0.1 and 10% of the total microbial flora in any given environment. Molecular Microbial Ecology gives a comprehensive guide to the recent revolution in the study of microorganisms in the environment. Details are given on molecular methods for isolating some of the previously uncultured and numerically dominant microbial groups. PCR-based approaches to studying prokaryotic systematics are described, including ribosomal RNA analysis and stable isotope probing. Later chapters cover DNA hybridisation techniques (including fluorescent in situ hybridisation), as well as genomic and metagenomic approaches to microbial ecology. Gathering together some of the world’s leading experts, this book provides an invaluable introduction to the modern theory and molecular methods used in studying microbial ecology.

Marine Metagenomics

Marine Metagenomics
  • Author : Takashi Gojobori,Tokio Wada,Takanori Kobayashi,Katsuhiko Mineta
  • Publisher :Unknown
  • Release Date :2019-07-24
  • Total pages :271
  • ISBN : 9789811381348
GET BOOK HERE

Summary : This book presents the state-of-art marine metagenome research and explains the method of marine metagenomic analysis in an easy-to-understand manner. Changes in the marine environment due to global warming and pollution have become a major global problem. Maintaining a healthy marine ecosystem requires advanced environmental monitoring and assessment systems. As such, the book presents a novel metagenomic monitoring method, which has been developed for comprehensive analyses of the DNA of microorganisms living in seawater to further our understanding of the dynamics of the marine environment. The book can be used as a primer for new researchers and as a manual on experimental methods.

Encyclopedia of Metagenomics

Encyclopedia of Metagenomics
  • Author : Karen E. Nelson
  • Publisher :Unknown
  • Release Date :2015-02-18
  • Total pages :1528
  • ISBN : 1461446740
GET BOOK HERE

Summary : Metagenomics has taken off as one of the major cutting-edge fields of research. The field has broad implications for human health and disease, animal production, and environmental health. Metagenomics has opened up a wealth of data, tools, technologies and applications that allow us to access the majority of organisms that we still cannot access in pure culture (an estimated 99% of microbial life). Numerous research groups are developing tools, approaches and applications to deal with this new field, as larger data sets from environments including the human body, the oceans and soils are being generated. See for example the human microbiome initiative (HMP; http://nihroadmap.nih.gov/hmp/) which has become a world-wide effort, and the Global Ocean Sampling (GOS) surveys; http://www.jcvi.org/cms/research/projects/gos/overview/). The number of publications as measured through PubMed that are focused on metagenomics continues to increase. The field of metagenomics continues to evolve with large common datasets available to the scientific community. A concerted effort is needed to collate all this information in a centralized place. By having all the information in an Encyclopedia form, we have an opportunity to gather seminal contributions from the leaders in the field, and at the same time provide this information to a significant number of junior and senior scientists. It is anticipated that the Encyclopedia will also be used by many other groups including, clinicians, undergraduate and graduate level students, as well as ethical and legal groups associated with or interested in the issues surrounding metagenome science.